Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAA
(((((((.(((((.(((((((&))))))).)))............))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284400
GeneSymbolLRRC28
Binding site2605,2640
Score0.846
Seed1
Au0.676
Energy-17.9
Binding len35
Me-7.108
Phylopstem0.4024640714285714
Phylopflank0.4329910162500001
Longest consecutive pairings7
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure