Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCATTTGGGCAGTACTGCTGTGCAACCCAGCTGCAAG
(((((((((.(((((((.(((&.))).)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284407
GeneSymbolTMEM40
Binding site864,904
Score1.0
Seed1
Au0.397
Energy-28.3
Binding len22
Me-5.18
Phylopstem-0.06808966666666666
Phylopflank-0.12578322325
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure