Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTGCTGCCCAGCAGCTAGGCAT
.((((((((((((.(((((((&))).)))).)))..))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284413
GeneSymbolHACL1
Binding site235,261
Score0.846
Seed1
Au0.471
Energy-21.4
Binding len26
Me-4.65
Phylopstem2.499240575
Phylopflank3.315924624999999
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure