Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTGGATGATTCCGCTTGTTTGCCGGCTGCGT
.(((((((((((..(((((((&))))))).........)))).........))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284416
GeneSymbolHACL1
Binding site43,80
Score0.846
Seed1
Au0.471
Energy-21.7
Binding len37
Me-5.939
Phylopstem0.3907716999999999
Phylopflank0.7001277474999998
Longest consecutive pairings7
Position of longest consecutive pairings30
Pairings in 3prime end7
Position5UTR
2D Structure