Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAACCATCCATACTGTGTAGGTGCAGC
(((((.((((((((((.(((.&))).))))))...........)))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284416
GeneSymbolHACL1
Binding site622,654
Score0.846
Seed0
Au0.5
Energy-20.9
Binding len32
Me-5.839
Phylopstem4.793927523809525
Phylopflank3.9691449375000003
Longest consecutive pairings6
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure