Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGCTGAGAGCCGCAGCCCCTGTGCAC
.((((((((((((((((((((&)))).)))....))))))))).....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284418
GeneSymbolLYSMD4
Binding site1912,1943
Score0.846
Seed1
Au0.324
Energy-22.9
Binding len31
Me-3.793
Phylopstem3.703716397
Phylopflank2.3934452352499997
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure