Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCAGACTAGCAGTTGCAGT
((((((((((((((....(((&)))....)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284422
GeneSymbolLYSMD4
Binding site1037,1060
Score0.923
Seed1
Au0.412
Energy-21.4
Binding len23
Me-4.906
Phylopstem-0.16863065333333332
Phylopflank-0.38991454000000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure