Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAAACAAAAAACAACAAAAAAGAAGCAGCAGCAGC
((((.(((((..(((((((((&))))))))).....................))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284423
GeneSymbolMYRIP
Binding site4466,4507
Score0.846
Seed0
Au0.588
Energy-21.6
Binding len41
Me-14.228
Phylopstem3.543148888888889
Phylopflank1.6302878225
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure