Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGATCTGCTACCGGCGCCAGCTGGAGCGGCAGCTGCAGC
((((((((((.(((.((.(((&.)))...)).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284499
GeneSymbolSLC43A2
Binding site1394,1436
Score0.846
Seed1
Au0.382
Energy-26.0
Binding len25
Me-7.498
Phylopstem-0.3082534
Phylopflank-0.2553969225
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure