Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGCAGGGCAGGGCTGTGCACCAGTGCGACCGCGGCTGGGC
.(.((((((((((((((.(((&.)))..)))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284501
GeneSymbolNUBP2
Binding site440,481
Score1.0
Seed0
Au0.279
Energy-28.4
Binding len23
Me-5.351
Phylopstem2.6155120642857144
Phylopflank4.199069133750001
Longest consecutive pairings14
Position of longest consecutive pairings3
Pairings in 3prime end7
PositionCDS
2D Structure