Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCCACAGCTGCC
..(((((((.(((((......&)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001284526
GeneSymbolAURKB
Binding site212,227
Score0.846
Seed1
Au0.397
Energy-18.7
Binding len15
Me-6.433
Phylopstem2.6968464714285716
Phylopflank3.71333289
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure