Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGGGGCCCTCTGCAGCTCAAG
(((.((((((((((.((((((&)))))).))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001285
GeneSymbolCLCA1
Binding site1350,1375
Score0.923
Seed0
Au0.471
Energy-20.9
Binding len25
Me-7.705
Phylopstem2.6850239285714284
Phylopflank2.2848999725000008
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure