Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCAGCAACCCCTTCTCCGCAGCAGATGCCAGGCTCCAGCTGCAT
..((((((((((..(.((((.&.))))).)))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001285389
GeneSymbolRCAN1
Binding site139,186
Score0.877
Seed1
Au0.485
Energy-19.7
Binding len21
Me-7.336
Phylopstem0.2209643692307692
Phylopflank0.9306758887500002
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure