Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCAGCAACCCCTTCTCCGCAGCAGATGCCAGGCTCCAGCTGCAT
..((((((((((..(.((((.&.))))).)))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001285391
GeneSymbolRCAN1
Binding site462,509
Score0.858
Seed1
Au0.485
Energy-19.7
Binding len21
Me-7.336
Phylopstem3.517272153846154
Phylopflank0.8579207074999998
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure