Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCAGAATAAACTTCAGCAACCCCTTCTCCGCAGCAGATGCCAGGC
.((((((((....(((.((...&.)).)))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001285393
GeneSymbolRCAN1
Binding site181,229
Score1.0
Seed1
Au0.471
Energy-18.6
Binding len20
Me-12.497
Phylopstem1.078295375
Phylopflank0.24951463750000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure