Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCAGCAACCCCTTCTCCGCAGCAGATGCCAGGCTCCAGCTGCAT
..((((((((((..(.((((.&.))))).)))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001285393
GeneSymbolRCAN1
Binding site193,240
Score0.954
Seed1
Au0.485
Energy-19.7
Binding len21
Me-7.336
Phylopstem1.654987630769231
Phylopflank0.12298294625
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure