Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCAACTGAGTCAACGGTTGCAGG
(((((((((((((((..((((&))))..))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001285444
GeneSymbolPDXDC1
Binding site1170,1198
Score1.0
Seed1
Au0.588
Energy-22.6
Binding len28
Me-4.171
Phylopstem3.4061711142857143
Phylopflank4.417931476250001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure