Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGGATTCGTGCCAGC
..(((((((..(((.(((((((&))))))).))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001285445
GeneSymbolPDXDC1
Binding site4138,4158
Score0.962
Seed1
Au0.441
Energy-18.0
Binding len20
Me-9.76
Phylopstem0.14029471428571427
Phylopflank-0.08916305750000002
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure