Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATAGGGGTTGTCAGGTA
((((((((..(..(((......&)))..)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001285445
GeneSymbolPDXDC1
Binding site1647,1664
Score0.846
Seed1
Au0.574
Energy-15.7
Binding len17
Me-10.872
Phylopstem3.203885625
Phylopflank2.5539551987499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure