Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGATGACCGCAGCA
.....(((((((((((((((.&))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001285449
GeneSymbolPDXDC1
Binding site1554,1572
Score0.923
Seed0
Au0.382
Energy-21.8
Binding len18
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure