Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCCACTGTGGTCATGGATGCAAG
(((((((((((((.(((((((&)))))))..))))))))......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001285523
GeneSymbolOPRM1
Binding site1565,1594
Score0.923
Seed1
Au0.54
Energy-20.6
Binding len29
Me-4.794
Phylopstem-0.0970422105263158
Phylopflank0.312925123625
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure