Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTTCAACAACCGCCAGCACAGCAAC
((((.(((((((((((.....&.)))))))).)))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286035
GeneSymbolARNT
Binding site2303,2330
Score0.808
Seed0
Au0.441
Energy-20.8
Binding len21
Me-8.057
Phylopstem3.3121856666666667
Phylopflank2.4768482750000005
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end3
PositionCDS
2D Structure