Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGGAGTCACACATTGTATGCA
.....(((((((((((.(((((&.)))))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286050
GeneSymbolFAM168A
Binding site959,985
Score0.846
Seed0
Au0.5
Energy-18.4
Binding len20
Me-13.666
Phylopstem0.04405226363636361
Phylopflank0.25925189125000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure