Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCACAGCCTATCCAGCAGCTGCC
..((((((((((((((..(((&)))..))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286050
GeneSymbolFAM168A
Binding site281,307
Score1.0
Seed1
Au0.368
Energy-24.7
Binding len26
Me-4.957
Phylopstem0.4181589100000001
Phylopflank2.04662244125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure