Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGACCTGCCAAGCGGCTGCAGG
((((((((((((((.(((((.&))))).)...)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286050
GeneSymbolFAM168A
Binding site1752,1778
Score0.808
Seed1
Au0.426
Energy-24.5
Binding len26
Me-4.673
Phylopstem-0.07189513157894738
Phylopflank-0.019592962499999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure