Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCAACTGTATTTATTGCTGCAT
.((((((((((((((.((((.&))))))))))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286055
GeneSymbolCNN3
Binding site1767,1792
Score0.923
Seed1
Au0.662
Energy-19.8
Binding len25
Me-4.026
Phylopstem-0.032598625000000006
Phylopflank0.14159677874999999
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure