Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCAACTGTATTTATTGCTGCAT
.((((((((((((((.((((.&))))))))))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286056
GeneSymbolCNN3
Binding site1769,1794
Score0.846
Seed1
Au0.662
Energy-19.8
Binding len25
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure