Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGTTTAAAGGACAACTACAAATCATGCTGGA
..(((((((((((((((((...&))))))))))....................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286059
GeneSymbolRAB30
Binding site9386,9424
Score0.846
Seed1
Au0.662
Energy-17.7
Binding len38
Me-4.957
Phylopstem5.785284567567566
Phylopflank6.1218323325
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end5
Position3UTR
2D Structure