Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAATATTGTAGGTGCAAT
(((((.((((((((((.(((.&))).)))))..))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286059
GeneSymbolRAB30
Binding site3227,3250
Score0.923
Seed0
Au0.721
Energy-19.8
Binding len23
Me-5.839
Phylopstem0.13454816666666666
Phylopflank0.36557850000000003
Longest consecutive pairings5
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure