Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTATACAATTGCAGAATGCT
..(((.((((((((((((((.&))).)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286059
GeneSymbolRAB30
Binding site7646,7667
Score0.923
Seed0
Au0.691
Energy-18.9
Binding len21
Me-6.858
Phylopstem0.8242550733333333
Phylopflank0.73062670025
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure