Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGTTTAAAGGACAACTACAAATCATGCTGGA
..(((((((((((((((((...&))))))))))....................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286060
GeneSymbolRAB30
Binding site9490,9528
Score0.846
Seed1
Au0.662
Energy-17.7
Binding len38
Me-4.957
Phylopstem6.039536756756756
Phylopflank5.987015901250002
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end5
Position3UTR
2D Structure