Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAATATTGTAGGTGCAAT
(((((.((((((((((.(((.&))).)))))..))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286061
GeneSymbolRAB30
Binding site3255,3278
Score0.846
Seed0
Au0.721
Energy-19.8
Binding len23
Me-5.839
Phylopstem0.6818394500000001
Phylopflank0.10643852000000001
Longest consecutive pairings5
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure