Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGAGAGCTGAGCTGTG
..((((((.(((((.(..(((&)))..).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286061
GeneSymbolRAB30
Binding site117,136
Score0.846
Seed1
Au0.515
Energy-18.6
Binding len19
Me-6.749
Phylopstem1.3836393333333332
Phylopflank1.6045867012500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure