Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGTTCACGACTGTAGCACTAGTGCC
..(((((((((((((((((((&)))))....))))))))))).....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286068
GeneSymbolC11orf54
Binding site2606,2635
Score0.923
Seed1
Au0.471
Energy-21.0
Binding len29
Me-4.957
Phylopstem0.13085826071428575
Phylopflank0.21658375249999998
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure