Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTTGTCCCAGCTGCT
..(((((((.((.....((((&)))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286070
GeneSymbolC11orf54
Binding site2890,2909
Score0.846
Seed1
Au0.441
Energy-20.6
Binding len19
Me-9.314
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure