Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATATAATATGTCAGGTG
((((((((((..(((((.....&)))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286071
GeneSymbolC11orf54
Binding site2554,2572
Score0.846
Seed1
Au0.691
Energy-16.9
Binding len18
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure