Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGAATCTGGACGTATGTTCCCCATCAGCCGCGGGATCCCCAACATGCTGCT
..(((((((((((((...((.&.))...)))))))).............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286082
GeneSymbolTRMT112
Binding site316,371
Score0.846
Seed1
Au0.485
Energy-21.0
Binding len33
Me-5.19
Phylopstem-0.3425044384615386
Phylopflank0.06190037249999997
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end4
PositionCDS
2D Structure