Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGTGGATCAAGCAGCTGTT
..((((((((((((...((((&)))).....))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286085
GeneSymbolCETP
Binding site557,581
Score1.0
Seed1
Au0.456
Energy-19.5
Binding len24
Me-5.925
Phylopstem1.6738829357142857
Phylopflank1.3923979662500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure