Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGCTGGCGCAGCTGTCAGA
(((((((((((.(.(((.(((&)))..))).).)))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286094
GeneSymbolTMEM9B
Binding site200,224
Score0.846
Seed1
Au0.382
Energy-21.4
Binding len24
Me-8.141
Phylopstem1.199364575
Phylopflank0.8586314157499999
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure