Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAAACACTTCGCTGCTGCAAG
(((((((.((((.(((..(((&)))....)))..)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286106
GeneSymbolATG5
Binding site1144,1169
Score0.846
Seed1
Au0.5
Energy-19.5
Binding len25
Me-7.54
Phylopstem1.0959933142857143
Phylopflank0.7667437000000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure