Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGTGCTTTTTGCGGCTGCGC
.(((((((((((..(((.(((&)))..)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286111
GeneSymbolATG5
Binding site69,92
Score0.846
Seed1
Au0.294
Energy-21.5
Binding len23
Me-5.939
Phylopstem0.8150220000000001
Phylopflank1.35268572875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure