Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTCAATCCTGCAACCCCAGCTGTC
..(((((((.(((((((.(((&.))).))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286113
GeneSymbolTHEMIS2
Binding site1844,1871
Score0.846
Seed1
Au0.368
Energy-23.2
Binding len21
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure