Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATGGAGACCTGAGGCTGCAGA
((((((((..((((((((((.&))))))...))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286113
GeneSymbolTHEMIS2
Binding site2194,2219
Score0.923
Seed1
Au0.559
Energy-22.0
Binding len25
Me-6.236
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure