Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTGCGGCAGCAGG
((((.(((((((((.......&))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286116
GeneSymbolCCDC90B
Binding site3058,3073
Score0.962
Seed0
Au0.456
Energy-18.4
Binding len15
Me-9.025
Phylopstem4.657725033333333
Phylopflank3.9366064162500005
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end1
Position3UTR
2D Structure