Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCTCTGCCAGGA
.(((((((......(((((...&)))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286130
GeneSymbolCNGB1
Binding site4937,4953
Score0.846
Seed1
Au0.368
Energy-16.5
Binding len16
Me-14.41
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure