Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCGCCGGACAGACCTACTACCGCAGCTGCAT
.((((((((((((.((.((((&.)))))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286130
GeneSymbolCNGB1
Binding site2714,2749
Score1.0
Seed1
Au0.412
Energy-30.8
Binding len21
Me-4.65
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure