Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTGCCTGGAAAATGCACTTACATATTTACAAGCGTTGTATGTCAA
...(((((((((((((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286139
GeneSymbolSLC36A4
Binding site4895,4943
Score0.923
Seed0
Au0.662
Energy-18.0
Binding len15
Me-6.515
Phylopstem4.317340307692309
Phylopflank4.017435853750001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure