Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATAAAGATGTCAGGA
.((((((((....((((((...&))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286159
GeneSymbolCCDC83
Binding site1407,1425
Score0.923
Seed1
Au0.603
Energy-16.7
Binding len18
Me-12.497
Phylopstem0.6488646000000001
Phylopflank1.0992635812499998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure