Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTGGGCCGGTGCGCGACTGCAGCAAAGATAACGGGGGCTGCAGT
((((((((((((((((..(((&.))).....)))))))))))...............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286164
GeneSymbolASTN1
Binding site1825,1872
Score0.846
Seed1
Au0.471
Energy-22.3
Binding len41
Me-3.938
Phylopstem3.454544374193548
Phylopflank4.462579637499999
Longest consecutive pairings11
Position of longest consecutive pairings21
Pairings in 3prime end6
PositionCDS
2D Structure