Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAAACTGCTAGACTGGAAT
((.((((((((((((((((((&))))))))).)))).)).))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286175
GeneSymbolC2CD5
Binding site1400,1425
Score0.846
Seed0
Au0.618
Energy-19.7
Binding len25
Me-5.495
Phylopstem4.698054185714286
Phylopflank5.558032681249999
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure